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Re: Protein Modeling C [NY Trial]

Posted: April 8th, 2010, 6:14 pm
by kjhsscioly
oh well... not much time to change anything, and Chia is the one doing our model

Re: Protein Modeling C [NY Trial]

Posted: April 10th, 2010, 8:38 pm
by sciolykid101
kjhsscioly wrote:oh well... not much time to change anything, and Chia is the one doing our model
I built mine the day before States and got 2 hours of sleep. XD

Re: Protein Modeling C [NY Trial]

Posted: April 14th, 2010, 7:29 pm
by AlchemyRocks
sciolykid101 wrote:
kjhsscioly wrote:oh well... not much time to change anything, and Chia is the one doing our model
I built mine the day before States and got 2 hours of sleep. XD
I did that before regionals, invitationals and state. :D
Gotta say, it was good practice before the on-site build.

Also, to whichever Wisconsin team put mini pigs on their model, I tip my hat to you.

Re: Protein Modeling C [NY Trial]

Posted: April 19th, 2010, 7:44 pm
by GCXC
This also is a trial event in texas im kinda confused on what im supposed to write on my index cards because im not sure if we just say whats what from my model or if i say a story and describe whats what in there???

Re: Protein Modeling C [NY Trial]

Posted: April 20th, 2010, 2:13 pm
by Phenylethylamine
GCXC wrote:This also is a trial event in texas im kinda confused on what im supposed to write on my index cards because im not sure if we just say whats what from my model or if i say a story and describe whats what in there???
You should have a key that describes what represents what in your model, and a paragraph or so explaining why you put in what you did and how it's relevant to the protein's function.

Re: Protein Modeling C [NY Trial]

Posted: April 20th, 2010, 5:05 pm
by GCXC
alrite that helps and is there anything else we put besides sidechains and associated molecules like disulfide or hydrogen bonds

Re: Protein Modeling C [NY Trial]

Posted: April 20th, 2010, 5:29 pm
by Phenylethylamine
GCXC wrote:alrite that helps and is there anything else we put besides sidechains and associated molecules like disulfide or hydrogen bonds
You can show anything that you think helps make the function of the protein clearer. Disulfide bonds could be useful- since they're vital in the tertiary structure of the protein- but hydrogen bonds are probably mostly unnecessary. Use your own judgement, though.

Re: Protein Modeling C [NY Trial]

Posted: April 23rd, 2010, 2:48 pm
by GCXC
what is the environment for the on site like :?: like is jmol already up or do we have to look through a file???

Re: Protein Modeling C [NY Trial]

Posted: April 25th, 2010, 2:36 pm
by Phenylethylamine
GCXC wrote:what is the environment for the on site like :?: like is jmol already up or do we have to look through a file???
They will give you very precise instructions for how to set up the on-site environment, or else it will already be open for you. It will look exactly like the Jmol environment for the pre-build that's available on the MSOE site, except instead of being 5HMG, it will be 2HU4.

Re: Protein Modeling C [NY Trial]

Posted: April 25th, 2010, 7:20 pm
by GCXC
thanks it was like that and time definitely ran by quickly but i still placed 2nd in it