Search found 3 matches

by garrett247
February 15th, 2011, 4:49 pm
Forum: 2011 Lab Events
Topic: Protein Modeling C
Replies: 334
Views: 71809

Re: Protein Modeling C

I'd try researching the properties of specific sidechains (there might be a useful link on the wiki, I don't remember exactly), then showing in Jmol the ones that sound like they might interact with DNA well. If they are known to interact with other molecules and are in the right spot (i.e., in con...
by garrett247
February 15th, 2011, 12:32 am
Forum: 2011 Lab Events
Topic: Protein Modeling C
Replies: 334
Views: 71809

Re: Protein Modeling C

I modeled the zinc fingers, the DNA, and plan on modeling the sidechains on the helices that interact with the DNA. I just made little sidechains and wired them to the mini-toober. For the notecard, you just explain what creative additions you modeled and why they matter to the protein's function. ...
by garrett247
February 14th, 2011, 9:49 pm
Forum: 2011 Lab Events
Topic: Protein Modeling C
Replies: 334
Views: 71809

Help With Protein Modeilng "Creative Addons"

Hello: We've ordered the mini-toobers and used the JMol program to modeling the pre-build protein (Klf4). What I'm having trouble with is the "creative add-ons". According to the Science Olympiad Wiki: ...the model must also include "creative additions" that showcase the function...

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